Sci Rep 2018

Publications

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. Arctic phytoplankton spring bloom diversity across the marginal ice zone in Baffin Bay. Molecular Ecology (submitted) - Deposited to BioRxiv, 2022.

Preprint PDF Project Supplementary material

. The Green Edge cruise: Understanding the onset, life and fate of the Arctic phytoplankton spring bloom. Earth System Science Data Discussions, 1-47, 2022.

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. metaPR2: a database of eukaryotic 18S rRNA metabarcodes with an emphasis on protists. Molecular Ecology Resources (submitted), 2022.

Preprint Code Dataset Project Project

. Diversity and biogeography of planktonic diatoms in Svalbard fjords: the Role of dispersal and Arctic endemism in phytoplankton community structuring. Elementa (submitted), 2021.

Project Project Project Supplementary material

. Global patterns and rates of habitat transitions across the eukaryotic tree of life. Nature Ecology and Evolution (submitted), 2021.

Preprint Code Dataset Project Project Supplementary material

. An 18S V4 rDNA metabarcoding dataset of protist diversity in the Atlantic inflow to the Arctic Ocean, through the year and down to 1000 m depth.. Earth System Science Data 13:4913-4928, 2021.

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. Hemiselmis aquamarina sp . nov . (Cryptomonadales , Cryptophyceae), a cryptomonad with a novel phycobiliprotein type (Cr-PC 564). Protist (in press), 2021.

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. pr2-primer: an 18S rRNA primer database for protists. Molecular Ecology Resources 22:168-179, 2021.

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. Phytoplankton diversity and ecology through the lens of high throughput sequencing technologies. In: Clementson, L., Eriksen, R., Willis, A. (Eds.), Advances in Phytoplankton Ecology. Applications of emerging technologies, Elsevier, pp. 353-413., 2021.

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. The MALINA Oceanographic Expedition: How Do Changes in Ice Cover, Permafrost and UV Radiation Impact Biodiversity and Biogeochemical Fluxes in the Arctic Ocean?. Earth System Science Data, 13: 1561–1592, 2021.

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. No evidence of phago-mixotropy in Micromonas polaris, the dominant picophytoplankton species in the Arctic. Journal of Phycology 57, 435-446, 2021.

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. Annual phytoplankton dynamics in coastal waters from Fildes Bay, Western Antarctic Peninsula.. Scientific Reports 11: 1368, 2021.

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. Taxonomic reassignment of Pseudohaptolina birgeri comb. nov. (Haptophyta). Phycologia, 56: 606-615, 2020.

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. Mantoniella beaufortii and Mantoniella baffinensis sp. nov. (Mamiellales, Mamiellophyceae), two new green algal species from the high Arctic. Journal of Phycology, 56: 37-51, 2020.

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. Culturable diversity of Arctic phytoplankton during pack ice melting. Elementa 8, p.6, 2020.

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. Green Edge ice camp campaigns: understanding the processes controlling the under-ice Arctic phytoplankton spring bloom. Earth System Science Data 12:151-176. DOI: 10.5194/essd-12-151-2020, 2020.

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. Contrasting pelagic ecosystem functioning in eastern and western Baffin Bay revealed by trophic network modeling. Elementa: Science of the Anthropocene, 8. DOI: 10.1525/elementa.397, 2020.

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. Temporal and spatial dynamics of Bacteria, Archaea and protists in equatorial coastal waters. Scientific Reports 9, 16390, 2019.

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. Novel diversity within marine Mamiellophyceae (Chlorophyta) unveiled by metabarcoding. Scientific Reports 9: 5190, 2019.

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. Rhythmicity of coastal marine picoeukaryotes, bacteria and archaea despite irregular environmental perturbations. The ISME journal 13:388-40, 2019.

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. High contribution of Rhizaria (Radiolaria) to vertical export in the California Current Ecosystem revealed by DNA metabarcoding. The ISME Journal, 13: 964–976, 2018.

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. Bolidophyceae, a sister picoplanktonic group of diatoms - a review. Frontiers in Marine Science, 5:370, 2018.

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. Green microalgae in marine coastal waters : The Ocean Sampling Day (OSD) dataset. Scientific reports, 8:14020, 2018.

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. Can molecular tools enhance long-term monitoring of marine protists?. Journal of Plankton Research, 40:519–536, 2018.

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. Alain Sournia, phycologist and philosopher (1940-2018). Cahiers de Biologie Marine 59: 403–7, 2018.

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. A novel species of the marine cyanobacterium Acaryochloris with a unique pigment content and lifestyle. Scientific reports, 8: 9142, 2018.

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. Small eukaryotic phytoplankton communities in tropical waters off Brazil are dominated by symbioses between Haptophyta and nitrogen-fixing cyanobacteria. The ISME Journal, (12), 5, pp. 1360–1374, https://doi.org/10.1038/s41396-018-0050-z, 2018.

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. DINOREF : A curated dinoflagellate (Dinophyceae) reference database for the 18S rRNA gene. Molecular Ecology Resources, 18, 974-987, https://doi.org/10.1111/1755-0998.12781, 2018.

PDF Dataset Project Source Document

. Comparison of coastal phytoplankton composition estimated from the V4 and V9 regions of the 18S rRNA gene with a focus on photosynthetic groups and especially Chlorophyta. Environmental Microbiology, (20), 2, pp. 506–520, https://doi.org/10.1111/1462-2920.13952, 2018.

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. Revision of the Genus Micromonas Manton et Parke (Chlorophyta, Mamiellophyceae), of the Type Species M. pusilla (Butcher) Manton & Parke and of the Species M. commoda van Baren, Bachy and Worden and Description of Two New Species Based on the Genetic and Phenotypic Characterization of Cultured Isolates. Protist, (168), 5, pp. 612–635, https://doi.org/10.1016/j.protis.2017.09.002, 2017.

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. Response of under-ice phytoplankton populations to light exposure during the Arctic spring bloom. ICOP meeting 2017, 2017.

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. Short timescale dynamics of phytoplankton in Fildes Bay, Antarctica. Antarctic Science, (29), 3, pp. 217–228, https://doi.org/10.1017/S0954102016000699, 2017.

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. Morphological and genetic diversity of Beaufort Sea diatoms with high contributions from the Chaetoceros neogracilis species complex. Journal of Phycology, (53), 1, pp. 161–187, https://doi.org/10.1111/jpy.12489, 2017.

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. Improvement of phytoplankton culture isolation using single cell sorting by flow cytometry. Journal of Phycology, (53), 2, pp. 271–282, https://doi.org/10.1111/jpy.12495, 2017.

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. Diversity and oceanic distribution of prasinophytes clade VII, the dominant group of green algae in oceanic waters. The ISME Journal, (11), 2, pp. 512–528, https://doi.org/10.1038/ismej.2016.120, 2017.

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. Chloropicophyceae, a new class of picophytoplanktonic prasinophytes. Scientific Reports, (7), 1, pp. 14019, https://doi.org/10.1038/s41598-017-12412-5, 2017.

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. Photosymbiosis in marine pelagic environments. In: The Marine Microbiome: An Untapped Source of Biodiversity and Biotechnological Potential, Springer International Publishing, pp. 305–332, 2016.

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. Survey of the green picoalga Bathycoccus genomes in the global ocean. Scientific Reports, (6), pp. 37900, https://doi.org/10.1038/srep37900, 2016.

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. Pseudo-nitzschia arctica sp. nov., a new cold-water cryptic Pseudo-nitzschia species within the P. pseudodelicatissima complex. Journal of Phycology, (52), 2, pp. 184–199, https://doi.org/10.1111/jpy.12395, 2016.

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. Pico and nanoplankton abundance and carbon stocks along the Brazilian Bight. PeerJ, (4), pp. e2587, https://doi.org/10.7717/peerj.2587, 2016.

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. Photosynthetic pigments of oceanic Chlorophyta belonging to prasinophytes clade VII. Journal of Phycology, (52), 1, pp. 148–155, https://doi.org/10.1111/jpy.12376, 2016.

PDF Project Project Source Document

. Estimating microbial populations by flow cytometry: Comparison between instruments. Limnology and Oceanography: Methods, (14), 11, pp. 750–758, https://doi.org/10.1002/lom3.10135, 2016.

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. Diversity and oceanic distribution of the Parmales (Bolidophyceae), a picoplanktonic group closely related to diatoms. The ISME Journal, (10), 10, pp. 2419–2434, https://doi.org/10.1038/ismej.2016.38, 2016.

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. Diversity and ecology of green microalgae in marine systems: an overview based on 18S rRNA gene sequences. Perspectives in Phycology, (3), 3, pp. 141–154, https://doi.org/10.1127/pip/2016/0059, 2016.

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. Diversity and distribution of haptophytes revealed by environmental sequencing and metabarcoding – a review. Perspectives in Phycology, (3), 2, pp. 77–91, https://doi.org/10.1127/pip/2016/0052, 2016.

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. Benthic protists: the under-charted majority. FEMS Microbiology Ecology, (92), 8, pp. fiw120, https://doi.org/10.1093/femsec/fiw120, 2016.

PDF Source Document Supplementary material

. The ocean sampling day consortium. GigaScience, (4), 1, pp. 27, https://doi.org/10.1186/s13742-015-0066-5, 2015.

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. PhytoREF: a reference database of the plastidial 16S rRNA gene of photosynthetic eukaryotes with curated taxonomy. Molecular Ecology Resources, (15), 6, pp. 1435–1445, https://doi.org/10.1111/1755-0998.12401, 2015.

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. Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing. Environmental Microbiology, (17), pp. 4035–4049, 2015.

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. The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing. PLoS Biol, (12), 6, pp. e1001889, 2014.

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. Metagenome sequencing of the microbial community of a solar saltern crystallizer pond at Cáhuil Lagoon, Chile. Genome Announcements, (2), pp. e01172-14, 2014.

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. An improved protocol for flow cytometry analysis of phytoplankton cultures and natural samples. Cytometry, (85), pp. 962–968, https://doi.org/10.1002/cyto.a.22517, 2014.

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. The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy. Nucleic Acids Research, (41), D1, pp. D597–D604, https://doi.org/10.1093/nar/gks1160, 2013.

Preprint Project

. Chimeric viruses blur the borders between the major groups of eukaryotic single-stranded DNA viruses. Nature Communications, (4), https://doi.org/10.1038/ncomms3700, 2013.

Preprint Project

. An annotated checklist of Marine Phytoplankton taxa at the SOMLIT-Astan time series off Roscoff (Western Channel, France): data collected from 2000 to 2010. Cahiers de Biologie Marine, (54), pp. 247–256, 2013.

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. Diversity and ecology of eukaryotic marine phytoplankton. In: Genomic insights gained into the Diversity, Biology and Evolution of Microbial Photosynthetic Eukaryotes, Elsevier, Amsterdam, pp. 1–53, 2012.

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. Unicellular cyanobacterium symbiotic with a single-celled eukaryotic alga. Science, (337), 6101, pp. 1546–1550, https://doi.org/10.1126/science.1222700, 2012.

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. Picophytoplankton biomass distribution in the global ocean. Earth System Science Data, (4), pp. 37–46, 2012.

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. Metagenomes of the Picoalga Bathycoccus from the Chile coastal upwelling. PLoS ONE, (7), 6, pp. e39648, https://doi.org/10.1371/journal.pone.0039648, 2012.

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. Lotharella reticulosa sp. nov.: A Highly Reticulated Network Forming Chlorarachniophyte from the Mediterranean Sea. Protist, (163), 1, pp. 91–104, 2012.

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. Evaluating the ribosomal internal transcribed spacer (ITS) as a candidate dinoflagellate barcode marker. PLoS ONE, (7), pp. e42780, 2012.

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. Diversity of cultured photosynthetic flagellates in the North East Pacific and Arctic Oceans in summer. Biogeosciences, (9), pp. 4553–4571, https://doi.org/10.5194/bg-9-4553-2012, 2012.

PDF Dataset Project Project Project

. Composition of the summer photosynthetic pico and nanoplankton communities in the Beaufort Sea assessed by T-RFLP and sequences of the 18S rRNA gene from flow cytometry sorted samples. The ISME journal, (6), 8, pp. 1480–1498, https://doi.org/10.1038/ismej.2011.213, 2012.

PDF Dataset Project

. Whole Genome Amplification (WGA) of marine photosynthetic eukaryote populations. FEMS Microbiology Ecology, (76), pp. 516–523, 2011.

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. Structure and seasonal dynamics of the eukaryotic picophytoplankton community in a wind-driven coastal upwelling ecosystem. Limnology and Oceanography, (56), pp. 2334–2346, 2011.

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. Prasinoderma singularis sp. nov., a solitary coccoid prasinophyte from the South East Pacific Ocean. Protist, (162), pp. 70–84, 2011.

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. Plastid 16S rRNA gene diversity among eukaryotic picophytoplankton sorted by flow cytometry from the South Pacific Ocean. PLoS ONE, (6), 4, pp. e18979, https://doi.org/10.1371, 2011.

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. Distribution of eukaryotic plankton in the English Channel and the North Sea in summer. Journal of Sea Research, (66), pp. 111–122, 2011.

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. Use of flow cytometric sorting to better assess the diversity of small photosynthetic eukaryotes in the English Channel. FEMS Microbiology Ecology, (72), pp. 165–178, 2010.

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. Structure and variability of the microbial community associated to the Alboran Sea frontal system (Western Mediterranean) in winter. Journal of Oceanography, Research and Data, (3), pp. 47–75, 2010.

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. Diversity of active marine picoeukaryotes in the eastern Mediterranean Sea unveiled using photosystem-II psbA transcripts. The ISME journal, (4), pp. 1044–1052, 2010.

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. Photosynthetic picoeukaryote community structure in the South East Pacific Ocean encompassing the most oligotrophic waters on Earth. Environmental Microbiology, (11), pp. 3105–3117, 2009.

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. Partenskyella glossopodia gen. et sp. nov., the first report of chlorarachniophyte that lacks pyrenoid. Protist, (160), pp. 137–150, 2009.

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. Groups without cultured representatives dominate eukaryotic picophytoplankton in the oligotrophic South East Pacific Ocean. PLoS ONE, (4), 10, pp. e7657, 2009.

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. Wide genetic diversity of picoplanktonic green algae (Chloroplastida) in the Mediterranean Sea uncovered by a phylum-biased PCR approach. Environmental Microbiology, (10), 7, pp. 1804–1822, 2008.

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. The diversity of small eukaryotic phytoplankton (≤3 μm) in marine ecosystems. FEMS Microbiology Reviews, (32), 5, pp. 795–820, https://doi.org/10.1111/j.1574-6976.2008.00121.x, 2008.

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. Protistan assemblages across the Indian Ocean, with a specific emphasis on the picoeukaryotes. Deep - Sea Research Part I - Oceanographic Research Papers, (55), pp. 1456–1473, 2008.

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. Plankton taxonomy in the computer age. Cahiers de Biologie Marine, (49), pp. 355–367, 2008.

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. Picoplankton diversity in the South-East Pacific Ocean from cultures. Biogeosciences, (5), pp. 203–214, 2008.

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. Introduction to the special section bio-optical and biogeochemical conditions in the South East Pacific in late 2004: the BIOSOPE program. Biogeosciences, (5), pp. 679–691, 2008.

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. Global phylogeography of marine Synechococcus and Prochlorococcus reveals a distinct partitioning of lineages amongst oceanic biomes. Environmental Microbiology, (10), pp. 147–161, 2008.

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. Distribution of micro-organisms along a transect in the South-East Pacific Ocean (BIOSOPE cruise) from epifluorescence microscopy. Biogeosciences, (5), pp. 311–321, 2008.

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. Chap 14. Biologie de la cellule eucaryote et micro-organismes eucaryotes. In: Brock - Biologie des Microorganismes, Pearson - Prentice Hall, Upper Saddle River, 2007.

. Picobiliphytes, a new marine picoplanktonic algal group with unknown affinities to other eukaryotes. Science, (315), pp. 252–254, 2007.

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. Oceanic Protists. Oceanography, (20), 2, pp. 130–134, https://doi.org/10.5670/oceanog.2007.57, 2007.

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. Ability of a “minimum” microbial food web model to reproduce response patterns observed in mesocosms manipulated with N and P, glucose, and Si. Journal of Marine Systems, (64), pp. 15–34, 2007.

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. Phytoplankton (version 2.0). In: Encyclopedia of Life Sciences, Wiley, 2006.

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. Telonemia, a new protist phylum with affinity to chromist lineages. Proceedings of the Royal Society of London Series B -Biological Sciences, (253), pp. 1833–1842, 2006.

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. Genetic diversity and habitats of two enigmatic marine alveolate lineages. Aquatic Microbial Ecology, (42), pp. 277–291, 2006.

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. Eukaryotic picoplankton communities of the Mediterranean Sea in summer assessed by molecular approaches (DGGE, TTGE, QPCR). FEMS Microbiology Ecology, (55), 3, pp. 403–415, 2006.

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. Analysis of photosynthetic picoeukaryote diversity at open ocean sites in the Arabian Sea using a PCR biased towards marine algal plastids. Aquatic Microbial Ecology, (43), pp. 79–93, 2006.

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. Phytoplankton cell counting by flow cytometry. In: Algal Culturing Techniques, Academic Press, pp. 253–267, 2005.

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. Mapping of picoeucaryotes in marine ecosystems with quantitative PCR of the 18S rRNA gene. FEMS Microbiology Ecology, (52), 1, pp. 79–92, 2005.

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. Late summer community composition and abundance of photosynthetic picoeukaryotes in Norwegian and Barents Seas. Limnology and Oceanography, (50), 5, pp. 1677–1686, 2005.

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. Ecotype diversity in the marine picoeukaryote Ostreococcus (Chlorophyta, Prasinophyceae).. Environmental Microbiology, (7), pp. 853–859, 2005.

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. The Roscoff Culture Collection (RCC): a collection dedicated to marine picoplankton. Nova Hedwigia, (79), 1⁄2, pp. 49–70, 2004.

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. High light effects on stress associated transcripts of the freshwater cyanobacterium Synechocystis sp. PCC 6803 and the marine cyanobacteria Prochlorococcus MED4 and Prochlorococcus MIT9313. Microbiology, (150), pp. 1271–1281, 2004.

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. Florenciella parvula gen. and sp. nov. (Dictyochophyceae, Heterokontophyta) a small flagellate isolated from the English Channel. Phycologia, (43), 6, pp. 658–668, 2004.

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. Diversity of picoplanktonic prasinophytes assessed by direct nuclear SSU rDNA sequencing of environmental samples and novel isolates retrieved from oceanic and coastal marine ecosystems. Protist, (155), pp. 193–214, 2004.

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. Composition and temporal variability of picoeukaryote communities at a coastal site of the English Channel from 18S rDNA sequences. Limnology and Oceanography, (49), 3, pp. 784–798, https://doi.org/10.4319/lo.2004.49.3.0784, 2004.

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. A single species Micromonas pusilla (Prasinophyceae) dominates the eukaryotic picoplankton in the western English Channel. Applied and Environmental Microbiology, (70), pp. 4064–4072, 2004.

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. Two-component systems in Prochlorococcus MED4: Genomic analysis and differential expression under stress. FEMS Microbiology Letters, (226), 1, pp. 135–144, 2003.

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. Quantitative assessment of picoeucaryotes in the natural environment using taxon specific oligonucleotide probes in association with TSA-FISH (Tyramide Signal Amplification - Fluorescent In Situ Hybridization) and flow cytometry. Applied and Environmental Microbiology, (69), pp. 5519–5529, 2003.

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. Clade-specific 16S ribosomal DNA oligonucleotides reveal the predominance of a single marine Synechococcus clade throughout a stratified water column in the Red Sea. Applied and Environmental Microbiology, (69), 5, pp. 2430–2443, https://doi.org/10.1128/AEM.69.5.2430, 2003.

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. Short-timescale variability of picophytoplankton abundance and cellular parameters in surface waters of the Alboran Sea (western Mediterranean). Journal of Plankton Research, (24), 7, pp. 635–651, 2002.

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. Kinetics of attachment of potentially toxic bacteria to Alexandrium tamarense. Aquatic Microbial Ecology, (28), 3, pp. 249–256, 2002.

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. Identification of bacteria associated with dinoflagellates (Dinophyceae) Alexandrium spp. using tyramide signal amplification-fluorescent in situ hybridization and confocal microscopy. Journal of Phycology, (38), 2, pp. 404–411, 2002.

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. Effects of inorganic and organic nutrient addition on a coastal microbial community (Isefjord, Denmark). Marine Ecology Progress Series, (228), pp. 3–14, 2002.

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. Are autotrophs less diverse than heterotrophs in marine picoplankton?. Trends in Microbiology, (10), 6, pp. 266–7., 2002.

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. Application of fluorescent in situ hybridization coupled with tyramide signal amplification (FISH-TSA) to assess eukaryotic picoplankton composition. Aquatic Microbial Ecology, (28), pp. 157–166, https://doi.org/10.3354/ame028157, 2002.

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. Analysis of the hli gene family in marine and freshwater cyanobacteria. FEMS Microbiology Letters, (215), 2, pp. 209–219, 2002.

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. Oceanic 18S rDNA sequences from picoplankton reveal unsuspected eukaryotic diversity. Nature, (409), 6820, pp. 607–610, 2001.

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. Grazing impact of two small heterotrophic flagellates on Prochlorococcus and Synechococcus. Aquatic Microbial Ecology, (26), 2, pp. 201–207, 2001.

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. Diel patterns of growth and division in marine picoplankton in culture. Journal of Phycology, (37), 3, pp. 357–369, 2001.

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. Diel expression of cell cycle-related genes in synchronized cultures of Prochlorococcus sp strain PCC 9511. Journal of Bacteriology, (183), 3, pp. 915–920, 2001.

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. Cell cycle regulation by light in Prochlorococcus strains. Applied and Environmental Microbiology, (67), 2, pp. 782–790, 2001.

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. Isolation of regulated genes of the cyanobacterium Synechocystis sp strain PCC 6803 by differential display. Journal of Bacteriology, (182), 20, pp. 5692–5699, 2000.

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. Flow cytometry analysis of marine picoplankton. In: In living colors: protocols in flow cytometry and cell sorting, Springer Verlag, pp. 421–454, 2000.

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. DNA, RNA analysis of phytoplankton by flow cytometry. In Robinson, J. P. [Ed.] Current Protocols in Cytometry. John Wiley & Sons, Inc, New York, pp. 1–18., 2000.

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. Abundance and diversity of prymnesiophytes in the picoplankton community from the equatorial Pacific Ocean inferred from 18S rDNA sequences. Limnology and Oceanography, (45), 1, pp. 98–109, 2000.

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. Flow cytometric analysis of phytoplankton, bacteria and viruses. In: Current protocols in cytometry, John Wiley & Sons, New York, pp. 1–15, 1999.

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. Differential distribution and ecology of Prochlorococcus and Synechococcus in oceanic waters: a review. In: Marine Cyanobacteria, Bulletin de l’Institut Océanographique de Monaco. Numéro spécial 19, pp. 457–475, 1999.

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. Variability in particle attenuation and chlorophyll fluorescence in the tropical Pacific: scales, patterns and biogeochemical implications. Journal of Geophysical Research, (104), C2, pp. 3401–3422, 1999.

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. Symbiomonas scintillans gen. et sp nov and Picophagus flagellatus gen. et sp nov (Heterokonta): Two new heterotrophic flagellates of picoplanktonic size. Protist, (150), 4, pp. 383–398, 1999.

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. Prochlorococcus, a marine photosynthetic prokaryote of global significance.. Microbiology and Molecular Biology Reviews, (63), 1, pp. 106–127, 1999.

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. Prochlorococcus growth rates in the central equatorial Pacific: an application of the fmax approach. Journal of Geophysical Research, (104), pp. 3391–3399, 1999.

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. Phycoerythins in the southern tropical and equatorial Pacific: evidence for new cyanobacterial types. Journal of Geophysical Research, (104), pp. 3311–3321, 1999.

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. Growth and grazing on Prochlorococcus and Synechococcus by two marine ciliates. Limnology and Oceanography, (44), 1, pp. 52–61, 1999.

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. Enumeration of marine viruses in culture and natural samples by flow cytometry. Applied and Environmental Microbiology, (65), 1, pp. 45–52, 1999.

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. Divinyl chlorophyll a-specific absorption coefficients and absorption efficiency factors for Prochlorococcus marinus: kinetics of photoacclimation. Marine Ecology - Progress Series, (188), pp. 21–32, 1999.

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. Diversity and abundance of Bolidophyceae (Heterokonta) in two oceanic regions. Applied and Environmental Microbiology, (65), 10, pp. 4528–4536, 1999.

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. Diel variability of photosynthetic picoplankton in the equatorial Pacific. Journal of Geophysical Research, (104), C2, pp. 3297, https://doi.org/10.1029/98JC01333, 1999.

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. Bolidomonas: a new genus with two species belonging to a new algal class, the Bolidophyceae (Heterokonta). Journal of Phycology, (35), pp. 368–381, 1999.

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. Picoplankton population dynamics in coastal waters of the northwestern Mediterranean Sea. Limnology and Oceanography, (43), 8, pp. 1916–1931, 1998.

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. Phytoplankton distribution and grazing near coral reefs. Limnology and Oceanography, (43), 4, pp. 551–563, 1998.

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. Application of a compact automatic sea water sampler to high frequency picoplankton studies. Aquatic Microbial Ecology, (14), 3, pp. 309–314, 1998.

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. The chitinous nature of filaments ejected by Phaeocystis (Prymnesiophyceae). Journal of Phycology, (33), 4, pp. 666–672, 1997.

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. Recent advances in the use of molecular techniques to assess the genetic diversity of marine photosynthetic micro-organisms. Vie et Milieu, (47), pp. 367–374, 1997.

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. Enumeration and cell cycle analysis of natural populations of marine picoplankton by flow cytometry using the nucleic acid stain SYBR Green I. Applied and Environmental Microbiology, (63), pp. 186–193, 1997.

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. Annual variability of phytoplankton and bacteria in the subtropical North Pacific Ocean at Station ALOHA during the 1991-1994 ENSO event. Deep - Sea Research Part I - Oceanographic Research Papers, (44), 2, pp. 167–192, 1997.

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. Ploidy analysis of the two motile forms of Chrysochromulina polylepis (Prymnesiophyceae). Journal of Phycology, (32), pp. 94–102, 1996.

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. Identification of the class Prymnesiophyceae and the genus _Phaeocystis_ with ribosomal RNA-targeted nucleic acid probes detected by flow cytometry. Journal of Phycology, (32), 5, pp. 858–868, 1996.

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. High degree of genetic variation in Prochlorococcus (Prochlorophyta) revealed by RFLP analysis. European Journal of Phycology, (31), 1, pp. 1–9, 1996.

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. Genetic characterisation of Emiliania huxleyi (Haptophyta). Journal of Marine Systems, (9), 1–2, pp. 13–31, 1996.

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. Effect of phosphorus starvation on the cell cycle of the photosynthetic prokaryote *Prochlorococcus* spp.. Marine Ecology - Progress Series, (132), pp. 265–274, 1996.

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. Effect of phosphorus on the Synechococcus cell cycle in surface Mediterranean waters during summer. Applied and Environmental Microbiology, (62), 7, pp. 2527–2533, 1996.

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. Coexistence of phycoerythrin and a chlorophyll a/b antenna in a marine prokaryote. Proceedings of the National Academy of Sciences of the United States of America, (93), 20, pp. 11126–11130, 1996.

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. Carbon biomass, and gross growth rates as estimated from C-14 pigment labelling, during photoacclimation in Prochlorococcus CCMP 1378. Marine Ecology - Progress Series, (145), 1–3, pp. 209–221, 1996.

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. Application of the novel nucleic acid dyes YOYO-1, YO-PRO-1, and PicoGreen for flow cytometric analysis of marine prokaryotes.. Applied and environmental microbiology, (62), 5, pp. 1649–1655, 1996.

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. The cell cycle of phytoplankton: coupling cell growth to population growth. In: Molecular Ecology of Aquatic Microbes, Springer-Verlag, Berlin Heidelberg New York, pp. 303–322, 1995.

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. Photosynthetic prokaryotes Prochlorococcus, Synechococcus in the western Mediterranean Sea in summer. In: EROS 2000 fifth Workshop Hambug, Water Pollution Research Report, 1995.

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. Growth of Prochlorococcus a photosynthetic prokaryote, in the equatorial Pacific Ocean. Science, (268), pp. 1480–1482, 1995.

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