This is a new project which aims at making publicly available a database of curated metabarcodes processed with dada2 and for which taxonomy is assigned with PR2.
The currently processed public data sets include:
- Arctic Ocean - Polarstern expedition ARK-XXVII/3 - 2012
- Arctic Ocean Survey - 2005-2011
- Arctic Ocean, Beaufort Sea, MALINA cruise - 2009
- Antarctic - Fieldes Bay - 2015
- Baffin Bay - 2013
- Bay of Naples - 2011
- Biomarks
- Blanes Time Series - 2004-2013
- Central Arctic Ocean - 2012
- Chukchi Sea - ICESCAPE - 2010
- Fieldes Bay, Antarctic - 2013
- Gdansk Gulf - 2012
- Gdansk Gulf - 2012 Hapto
- Gulf of Finland - 2012-2013
- Malaspina expedition - surface - 2010-2011
- Malaspina expedition - vertical profiles - 2010-2011
- Nansen Basin - 2012
- Nares Strait - 2014
- Ocean Sampling Day - 2014 - V4 LGC
- Ocean Sampling Day - 2014 - V4 LW
- Ocean Sampling Day - 2015 - V4
- Oslo fjord - 2009-2011
- Tara Oceans - 2009-2012
- White Sea - 2013-2015
Other non-public data sets include:
- Cruises
- Arctic - Green Edge project 2015-2016 in Baffin Bay (Ice Camp and Amundsen Cruise)
- North West Pacific (data from Korea)
- Brazil coastal lagoons
- Time series
- Roscoff (2009-2016)
- Penzé estuary (2004-2012)
If you are interested please contact me.